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Genome sequence of genome-editing strains

ここでは平成30年度ナショナルバイオリソースプロジェクトゲノム情報等整備プログラムにおいて得られた各種ゲノム編集系統のショウジョウバエの配列データがダウンロードできます。

ダウンロードファイルはgzip形式で圧縮されています。

Raw sequencing datas

PG2865_01_a (Genotype: y¹w¹¹¹⁸; attP40{nos-Cas9}/CyO )
- PG2865_01A2929_H1_L002_R1.fastq.gz.(3.72GB)
- PG2865_01A2929_H1_L002_R2.fastq.gz.(3.85GB)
PG2865_02_a (Genotype: y¹w¹¹¹⁸; attP2{nos-Cas9}/TM6B )
- PG2865_02A3030_H1_L002_R1.fastq.gz.(3.16GB)
- PG2865_02A3030_H1_L002_R2.fastq.gz.(3.35GB)
PG2865_03_a (Genotype: y¹w¹¹¹⁸FRT19A; ey-FLP⁵ )
- PG2865_03A3131_H1_L002_R1.fastq.gz.(3.36GB)
- PG2865_03A3131_H1_L002_R2.fastq.gz.(3.56GB)
PG2865_04_a (Genotype: y^d2w¹¹¹⁸ey-FLP² GMR-lacZ; FRT40A )
- PG2865_04A3232_H1_L002_R1.fastq.gz.(3.54GB)
- PG2865_04A3232_H1_L002_R2.fastq.gz.(3.64GB)
PG2865_05_a (Genotype: y^d2w¹¹¹⁸ey-FLP² GMR-lacZ; FRT42D )
- PG2865_05A3333_H1_L002_R1.fastq.gz.(3.79GB)
- PG2865_05A3333_H1_L002_R2.fastq.gz.(3.93GB)
PG2865_06_a (Genotype: y^d2w¹¹¹⁸ey-FLP² GMR-lacZ; FRT80B )
- PG2865_06A3434_H1_L002_R1.fastq.gz.(3.23GB)
- PG2865_06A3434_H1_L002_R2.fastq.gz.(3.38GB)
PG2865_07_a (Genotype: y^d2w¹¹¹⁸ey-FLP² GMR-lacZ; FRT82B )
- PG2865_07A3535_H1_L002_R1.fastq.gz.(4.75GB)
- PG2865_07A3535_H1_L002_R2.fastq.gz.(4.92GB)
PG2865_08_a (Genotype: w^*; FRTG13 )
- PG2865_08A3636_H1_L002_R1.fastq.gz.(2.96GB)
- PG2865_08A3636_H1_L002_R2.fastq.gz.(3.02GB)
PG2865_09_a (Genotype: w^*; FRT2A )
- PG2865_09A3737_H1_L002_R1.fastq.gz.(2.99GB)
- PG2865_09A3737_H1_L002_R2.fastq.gz.(3.13GB)

Other datas

Mapping summary (PDF file)
Reference data (PDF file)

Full-length cDNAclones

ここでは平成17年度ナショナルバイオリソースプロジェクトゲノム情報等整備プログラムにおいて得られたショウジョウバエの各種ESTデータがダウンロードできます。

ダウンロードファイルはzip形式で圧縮されています。

Drosophila auraria adult full-length cDNA clone, 5' and 3' end. (4.08MB)

Qualifier	Value
clone_lib	Drosophila full-length cDNA library
organism	Drosophila auraria
mol_type	mRNA
tissue_type	whole
dev_stage	adult

Drosophila sechellia adult full-length cDNA clone, 5' and 3' end. (4.68MB)

Qualifier	Value
clone_lib	Drosophila full-length cDNA library
organism	Drosophila sechellia
mol_type	mRNA
tissue_type	whole
dev_stage	adult

Drosophila simulans adult full-length cDNA clone, 5' and 3' end. (4.55MB)

Qualifier	Value
clone_lib	Drosophila full-length cDNA library
organism	Drosophila simulans
mol_type	mRNA
tissue_type	whole
dev_stage	adult
sex	female

Drosophila simulans adult full-length cDNA clone, 5' and 3' end. (4.42MB)

Qualifier	Value
clone_lib	Drosophila full-length cDNA library
organism	Drosophila simulans
mol_type	mRNA
tissue_type	whole
dev_stage	adult
sex	male

Drosophila simulans larvae full-length cDNA clone, 5' and 3' end. (4.12MB)

Qualifier	Value
clone_lib	Drosophila full-length cDNA library
organism	Drosophila simulans
mol_type	mRNA
tissue_type	whole
dev_stage	third-stage larvae

BAC and BAC End Sequences

ここでは平成15年度ナショナルバイオリソースプロジェクトゲノム情報等整備プログラムにおいて得られたショウジョウバエの各種BACデータがダウンロードできます。

See full-text paper for details.

BAC clones are available at RIKEN BioResouce Research Center.

Sequence set registered in DDBJ

Drosophila melanogaster DNA, genomic survey sequence. (0.82MB)
Drosophila simulans DNA, genomic survey sequence. (0.93MB)
Drosophila sechellia DNA, genomic survey sequence. (0.89MB)
Drosophila auraria DNA, genomic survey sequence. (0.74MB)
Drosophila ananassae DNA, genomic survey sequence. (0.94MB)
all-five-species.fasta. (42.00MB)

All sequence set

This sequence set contains the above sequences of the five species and the sequences which are not registered in DDBJ.
This is the data at the stage of 'Q20-passed BESs'.

five.fa. (40.33MB)